CDS

Accession Number TCMCG077C03406
gbkey CDS
Protein Id KAF5728662.1
Location complement(join(6831909..6831980,6832117..6832186,6832266..6832357,6833122..6833167,6833263..6833321,6833425..6833506,6833694..6833830,6834024..6834086,6834237..6834356,6834468..6834569,6835413..6835499,6835624..6835716,6836138..6836215,6836729..6836836,6838464..6838526,6838633..6838758,6838880..6838999,6840237..6840461))
Organism Tripterygium wilfordii
locus_tag HS088_TW21G00811

Protein

Length 580aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA542587, BioSample:SAMN11634134
db_source JAAARO010000021.1
Definition Proline-rich spliceosome-associated family protein isoform 2 [Tripterygium wilfordii]
Locus_tag HS088_TW21G00811

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor 3B subunit
KEGG_TC -
KEGG_Module M00352        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12829        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005686        [VIEW IN EMBL-EBI]
GO:0005689        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACAGCCGAGGTAGTTCCATATCAAAACGGCGTCCTATCAAATGGAGATCTAACCTCTAAAGCTGTGAAGAAGTCGCGGGAAAGTGAACGACGCCGTCGGAGACGGAAGCAGAAGAAGAACAATAAGGCGTCTCAAGTTTCAGAGGCGGCGGACTCTGCCAACGGCGACGGAAGCGACGCTGGTGAAGATGAGGCTAAAGAGAATGGTGATCCTCAACAACAGGTTGTGGAGAAAGTTGAAATTGAGTATGTACCAGAACATGCAGAGCTAGATGATGGTTTGGATGAAGAGTTTAGAAAGGTCTTTGAGAAATTCAGTTTCCGTGACACTGCTGGTGCTGAGGAGAATGATAAAAAGGATGAGTCTGCCCAAAATGCTGACACAAAGAAAAAGGCTGATTCAGACTCTGATGAGGAAGAAGAGGATAGTCAACAAAGAGAGAAAGGGTTCTCAAATAAGAAGAAAAAGCTTCAACGACGGATGAAGATCGCTGAATTGAAACAAATATGCTCAAGGCCTGATGTTGTTGAGGTGTGGGATGCCACTTCTGCAGACCCAAAATTGCTGGTATTTCTGAAAGCATACCGGAACACAGTTCCTGTGCCGAGGCATTGGTGTCAGAAGAGGAAGTTCTTACAGGGTAAGCGTGGTATTGAAAAGCAACCTTTTCAGCTCCCTGATTTTGTTGCTGCCACTGGAATTGAGAAAATTAGACAGGCGTATACAGAAAAGGAGGACGGTAAGAAGTTAAAACAGAAGCAGCGTGAGCGTATGCAGCCAAAGATGGGCAAAATGGATATTGACTATCAGGTCCTCCATGATGCCTTTTTTAAATACCAAACAAAGCCAAAGCTGACTACTCATGGTGATCTGTATCATGAAGGGAAAGAATTTGAGGTAAAGCTTAGGGAGATGAAGCCAGGCACACTGTCGCAAGAACTAAAAGAAGCACTTGGTATGGCTGAGGGTGCTCCCCCACCATGGCTTATTAATATGCAGAGATATGGGCCTCCACCATCTTACCCGCACCTGAAAATCCCTGGACTGAATGCTCCTATTCCTCTGGGGACTAGCTTTGGATATCATGCTGGTGGTTGGGGCAAGCCTCCTGTTGATGAATTTGGACGTCCTCTGTATGGAGATGTCTTTGGTGTTCAGCAACAAGAACAGCCCAATTATGAGGAAGAGCCAGTTGACAAGACCAAGCACTGGGGTGATTTGGAAGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAGATTGAAGAAGAGGAGCTTGAGGATGGCATTCAATCTGTAGATAGCCTTTCAAGCACTCCGACTGGTGTTGAGACACCTGATGTTATTGATCTCCGCAAGCAACAAAGAAAGGAACCTGACAGGCCTCTTTACCAAGTACTTGAAGAGAAAGAAGAAAAGATTGCTCCAGGAACCTTACTTGGAACAACACACACGTATGTGGTTGGCAGTGGCACCCAAGATAAGACATCTGCCAAGAGGGTTGATTTGCTTAAAGGTCAAAAGTCGGATAGGGTGGATGTTACACTTGCACCTGAAGAACTGGAATCAATGGAAAACGTTTTGCCGGCTAAGTACGAAGAAGCAAGGGAGGAGGAGAAGCTGCGTAGTCAGCGTGAGGATTTCAGTGACATGGTTGCTGAGAATGAGAAGAAAAGGAAACGGAAAATGCAAGAAAAAGAGGGGAAATCGAAGAAAAAGGATTTCAAATTCTAA
Protein:  
MTAEVVPYQNGVLSNGDLTSKAVKKSRESERRRRRRKQKKNNKASQVSEAADSANGDGSDAGEDEAKENGDPQQQVVEKVEIEYVPEHAELDDGLDEEFRKVFEKFSFRDTAGAEENDKKDESAQNADTKKKADSDSDEEEEDSQQREKGFSNKKKKLQRRMKIAELKQICSRPDVVEVWDATSADPKLLVFLKAYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFVAATGIEKIRQAYTEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTHGDLYHEGKEFEVKLREMKPGTLSQELKEALGMAEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPLGTSFGYHAGGWGKPPVDEFGRPLYGDVFGVQQQEQPNYEEEPVDKTKHWGDLEEEEEEEEEEEEEEEIEEEELEDGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPDRPLYQVLEEKEEKIAPGTLLGTTHTYVVGSGTQDKTSAKRVDLLKGQKSDRVDVTLAPEELESMENVLPAKYEEAREEEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF